GENOMIC SIGNATURES OF EVOLUTIONARY RESHUFFLING IN MAMMALS
Journal Article
Capilla, L., Sanchez-Guillen, R. A., Farré, M., Larkin, D. M., Ventura, J., & Ruiz-Herrera, A. GENOMIC SIGNATURES OF EVOLUTIONARY RESHUFFLING IN MAMMALS. Chromosome Research, 23(2), 375-375
All Outputs (48)
Third Report on Chicken Genes and Chromosomes 2015
Journal Article
Schmid, M., Smith, J., Burt, D. W., Aken, B. L., Antin, P. B., Archibald, A. L., Ashwell, C., Blackshear, P. J., Farré, M., & Larkin, D. M. (in press). Third Report on Chicken Genes and Chromosomes 2015. Cytogenetic and Genome Research, 145, 78-179. https://doi.org/10.1159/000430927
Population structure and history of the Welsh sheep breeds determined by whole genome genotyping
Journal Article
Beynon, S. E., Slavov, G. T., Farré, M., Sunduimijid, B., Waddams, K., Davies, B., Haresign, W., Kijas, J., MacLeod, I. M., Newbold, C. J., Davies, L., & Larkin, D. M. (in press). Population structure and history of the Welsh sheep breeds determined by whole genome genotyping. BMC Genetics, 16(65), https://doi.org/10.1186/s12863-015-0216-x
Synteny Explorer: An Interactive Visualization Application for Teaching Genome Evolution
Journal Article
Bryan, C., Guterman, G., Ma, K.-L., Lewin, H., Larkin, D. M., Kim, J., Ma, J., & Farre Belmonte, M. Synteny Explorer: An Interactive Visualization Application for Teaching Genome Evolution. IEEE Transactions on Visualization and Computer Graphics, 23(1), 711-720. https://doi.org/10.1109/TVCG.2016.2598460
Novel insights into chromosome evolution in birds, archosaurs, and reptiles
Journal Article
Farré, M., Narayan, J., Slavov, G. T., Damas, J., Auvil, L., Li, C., Jarvis, E. D., Burt, D. W., Griffin, D. K., & Larkin, D. M. (in press). Novel insights into chromosome evolution in birds, archosaurs, and reptiles. Genome Biology and Evolution, 8(8), 2442-2451. https://doi.org/10.1093/gbe/evw166Homologous synteny blocks (HSBs) and evolutionary breakpoint regions (EBRs) in mammalian chromosomes are enriched for distinct DNA features, contributing to distinct phenotypes. To reveal HSB and EBR roles in avian evolution, we performed a sequence-... Read More about Novel insights into chromosome evolution in birds, archosaurs, and reptiles.
Contrasting origin of B chromosomes in two cervids (Siberian roe deer and grey brocket deer) unravelled by chromosome-specific DNA sequencing
Journal Article
Makunin, A., Kichigin, I. G., Larkin, D. M., O'Brien, P. C. M., Ferguson-Smith, M. A., Yang, F., Proskuryakova, A. A., Vorobieva, N. V., Chernyaeva, E., O'Brien, S. J., Graphodatsky, A. S., & Trifonov, V. (in press). Contrasting origin of B chromosomes in two cervids (Siberian roe deer and grey brocket deer) unravelled by chromosome-specific DNA sequencing. BMC Genomics, 17(1), 618. https://doi.org/10.1186/s12864-016-2933-6
G-Anchor: a novel approach for whole-genome comparative mapping utilising evolutionary conserved DNA sequences
Journal Article
Lenis, V. E., Swain, M., & Larkin, D. M. (in press). G-Anchor: a novel approach for whole-genome comparative mapping utilising evolutionary conserved DNA sequences. GigaScience, 7(5), https://doi.org/10.1093/gigascience/giy017Here we introduce G-Anchor, a new, fast, and efficient pipeline that uses a strictly limited but highly effective set of local sequence alignments to anchor (or map) an animal genome to another species’ reference genome. G-Anchor makes novel use of a... Read More about G-Anchor: a novel approach for whole-genome comparative mapping utilising evolutionary conserved DNA sequences.
Extreme heterogeneity in sex chromosome differentiation and dosage compensation in livebearers
Journal Article
Darolti, I., Wright, A. E., Sandkam, B. A., Morris, J., Bloch, N. I., Farré, M., Fuller, R. C., Bourne, G. R., Larkin, D. M., Breden, F., & Mank, J. E. (in press). Extreme heterogeneity in sex chromosome differentiation and dosage compensation in livebearers. https://doi.org/10.1073/pnas.1905298116Morphologically and functionally distinct X and Y chromosomes have repeatedly evolved across the tree of life. However, the extent of differentiation between the sex chromosomes varies substantially across species. As sex chromosomes diverge, the Y c... Read More about Extreme heterogeneity in sex chromosome differentiation and dosage compensation in livebearers.