Global disparities in SARS-CoV-2 genomic surveillance
(2022)
Journal Article
Brito, A. F., Semenova, E., Dudas, G., Hassler, G. W., Kalinich, C. C., Kraemer, M. U., …GISAID core curation team. (in press). Global disparities in SARS-CoV-2 genomic surveillance. Nature Communications, https://doi.org/10.1101/2021.08.21.21262393
All Outputs (8)
Seasonal dynamics of the wild rodent faecal virome (2022)
Journal Article
Raghwani, J., Faust, C. L., François, S., Nguyen, D., Marsh, K., Raulo, A., …Pybus, O. G. (2023). Seasonal dynamics of the wild rodent faecal virome. Molecular Ecology, https://doi.org/10.1111/mec.16778Viral discovery studies in wild animals often rely on cross-sectional surveys at a single time point. As a result, our understanding of the temporal stability of wild animal viromes remains poorly resolved. While studies of single host-virus systems... Read More about Seasonal dynamics of the wild rodent faecal virome.
Impact of host age on viral and bacterial communities in a waterbird population (2022)
Journal Article
Hill, S. C., François, S., Thézé, J., Smith, A., Simmonds, P., Perrins, C., …Pybus, O. (in press). Impact of host age on viral and bacterial communities in a waterbird population. ISME Journal,Wildlife harbour pathogens that can harm human or livestock health and are the source of most emerging infectious diseases. It is rarely considered how changes in wildlife population age-structures or how age-stratified behaviours might alter the lev... Read More about Impact of host age on viral and bacterial communities in a waterbird population.
Molecular and genomic investigation of an urban outbreak of dengue serotype 2 in Angola, 2017-2019 (2022)
Journal Article
Neto, Z., Martinez, P., Hill, S., Jandondo, D., Thézé, J., Mirandela, M., …Afonso, J. (2022). Molecular and genomic investigation of an urban outbreak of dengue serotype 2 in Angola, 2017-2019. PLoS Neglected Tropical Diseases, https://doi.org/10.1371/journal.pntd.0010255
Understanding Sabiá virus infections (Brazilian mammarenavirus) (2022)
Journal Article
Nastri, A. C., Duarte-Neto, A. N., Casadio, L. V. B., Souza, W. M. D., Claro, I. M., Manuli, E. R., …Levin, A. S. (2022). Understanding Sabiá virus infections (Brazilian mammarenavirus). Travel Medicine and Infectious Disease, 48, 102351. https://doi.org/10.1016/j.tmaid.2022.102351
Phylogenetic and phylodynamic approaches to understanding and combating the SARS-CoV-2 pandemic. (2022)
Journal Article
Attwood, S., Hill, S., David, A., Connor, T., & Pybus, O. (2022). Phylogenetic and phylodynamic approaches to understanding and combating the SARS-CoV-2 pandemic. Nature Reviews Genetics, https://doi.org/10.1038/+s41576-022-00483-8
Genomic epidemiology of early SARS-CoV-2 transmission dynamics in Gujarat, India (2022)
Journal Article
Raghwani, J., du Plessis, L., McCrone, J. T., Hill, S. C., Parag, K. V., Thézé, J., …Joshi, C. (2022). Genomic epidemiology of early SARS-CoV-2 transmission dynamics in Gujarat, India. Emerging Infectious Disease, https://doi.org/10.1101/2021.08.31.21262680
Mapping environmental suitability of Haemagogus and Sabethes spp. mosquitoes to understand sylvatic transmission risk of yellow fever virus in Brazil (2022)
Journal Article
Li, S. L., Acosta, A. L., Hill, S. C., Brady, O. J., de Almeida, M. A., Cardoso, J. D. C., …Messina, J. P. (2022). Mapping environmental suitability of Haemagogus and Sabethes spp. mosquitoes to understand sylvatic transmission risk of yellow fever virus in Brazil. PLoS Neglected Tropical Diseases,