Breakpoint regions and homologous synteny blocks in chromosomes have different evolutionary histories
Journal Article
Larkin, D. M., Pape, G., Donthu, R., Auvil, L., Welge, M., & Lewin, H. A. Breakpoint regions and homologous synteny blocks in chromosomes have different evolutionary histories. Genome Research, 19(5), 770-777. https://doi.org/10.1101/gr.086546.108
Outputs (48)
Analyses of pig genomes provide insight into porcine demography and evolution
Journal Article
Larkin, D. M. Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491(7424), 393-398. https://doi.org/10.1038/nature11622
Whole-genome resequencing of two elite sires for the detection of haplotypes under selection in dairy cattle
Journal Article
Larkin, D. M., Daetwyler, H. D., Hernandez, A. G., Wright, C. L., Hetrick, L. A., Boucek, L., Bachman, S. L., Band, M. R., Akraiko, T. V., Cohen-Zinder, M., Thimmapuram, J., Macleod, I. M., Harkins, T. T., McCague, J. E., Goddard, M. E., Hayes, B. J., & Lewin, H. A. (in press). Whole-genome resequencing of two elite sires for the detection of haplotypes under selection in dairy cattle. https://doi.org/10.1073/pnas.1114546109
Reference-assisted chromosome assembly
Journal Article
Kim, J., Larkin, D. M., Asan, Q. C., Zhang, Y. F., Ge, R. L., Auvil, L., Capitanu, B., Zhang, G. J., Lewin, H. A., & Maj, J. Reference-assisted chromosome assembly. https://doi.org/10.1073/pnas.1220349110
AVIAN CYTOGENETICS GOES FUNCTIONAL
Presentation / Conference Contribution
Griffin, D. K., Farré, M., Lithgow, P., O'Connor, R., Fowler, K. E., Romanov, M., & Larkin, D. M. AVIAN CYTOGENETICS GOES FUNCTIONAL
Genome-wide adaptive complexes to underground stresses in blind mole rats Spalax
Journal Article
Fang, X. D., Nevo, E., Han, L. J., Levanon, E. Y., Zhao, J., Avivi, A., Larkin, D. M., Jiang, X. T., Feranchuk, S., Zhu, Y. B., Fishman, A., Feng, Y., Sher, N., Xiong, Z. Q., Hankeln, T., Huang, Z. Y., Gorbunova, V., Zhang, L., Zhao, W., Wildman, D. E., …Wang, J. Genome-wide adaptive complexes to underground stresses in blind mole rats Spalax. Nature Communications, 5, https://doi.org/10.1038/ncomms4966
AVIAN ANCESTRAL KARYOTYPE RECONSTRUCTION AND DIFFERENTIAL RATES OF INTER-AND INTRA-CHROMOSOMAL CHANGE IN DIFFERENT LINEAGES
Presentation / Conference Contribution
Romanov, M. N., Farré, M., Lithgow, P. E., O'Connor, R., Fowler, K. E., Skinner, B. M., Larkin, D. M., & Griffin, D. K. AVIAN ANCESTRAL KARYOTYPE RECONSTRUCTION AND DIFFERENTIAL RATES OF INTER-AND INTRA-CHROMOSOMAL CHANGE IN DIFFERENT LINEAGES
RECONSTRUCTION OF THE PUTATIVE SAURIAN KARYOTYPE AND THE HYPOTHETICAL CHROMOSOME REARRANGEMENTS THAT OCCURRED ALONG THE DINOSUAR LINEAGE
Presentation / Conference Contribution
O'Connor, R. E., Romanov, M. N., Farré, M., Larkin, D. M., & Griffin, D. K. RECONSTRUCTION OF THE PUTATIVE SAURIAN KARYOTYPE AND THE HYPOTHETICAL CHROMOSOME REARRANGEMENTS THAT OCCURRED ALONG THE DINOSUAR LINEAGE
The Genome 10K Project: A Way Forward Further
Journal Article
Koepfli, K. P., Paten, B., Antunes, A., Belov, K., Bustamante, C., Castoe, T. A., Clawson, H., Crawford, A. J., Diekhans, M., Distel, D., Durbin, R., Earl, D. A., Fujita, M. K., Gamble, T., Georges, A., Gemmell, N. J., Gilbert, M. T. P., Graves, J. M., Green, R. E., Hickey, G., …O'Brien, S. J. The Genome 10K Project: A Way Forward Further. Annual Review of Animal Biosciences, 3, 57-111. https://doi.org/10.1146/annurev-animal-090414-014900The Genome 10K Project was established in 2009 by a consortium of biologists and genome scientists determined to facilitate the sequencing and analysis of the complete genomes of 10,000 vertebrate species. Since then the number of selected and initia... Read More about The Genome 10K Project: A Way Forward Further.
AMNIOTE EVOLUTION: THE ROLE OF CHROMOSOME REARRANGEMENTS
Presentation / Conference Contribution
Farré, M., Narayan, J., Slavov, G. T., Auvil, L., Lewin, H. A., & Larkin, D. M. AMNIOTE EVOLUTION: THE ROLE OF CHROMOSOME REARRANGEMENTS