Genomic Epidemiology of Early SARS-CoV-2 Transmission Dynamics, Gujarat, India

Raghwani, J; du Plessis, L; McCrone, JT; Hill, SC; Parag, KV; Theze, J; Kumar, D; Puvar, A; Pandit, R; Pybus, OG; Fournie, G; Joshi, M; Joshi, C

doi:10.3201/eid2804.212053

All Outputs (6)

Phylodynamic approaches to studying avian influenza virus: a review (2023)
Journal Article
Carnegie, L., Raghwani, J., Fournié, G., & Hill, S. (2023). Phylodynamic approaches to studying avian influenza virus: a review. Avian Pathology, https://doi.org/10.1080/03079457.2023.2236568

Genomic assessment of invasion dynamics of SARS-CoV-2 Omicron BA.1 (2023)
Journal Article
Tsui, J. L., McCrone, J. T., Lambert, B., Bajaj, S., Inward, R. P. D., Bosetti, P., …The COVID-19 Genomics UK (COG-UK) consortium¶. (2023). Genomic assessment of invasion dynamics of SARS-CoV-2 Omicron BA.1. Science, 381(6655), 336-343. https://doi.org/10.1126/science.adg6605

H9N2 avian influenza virus dispersal along Bangladeshi poultry trading networks (2023)
Journal Article
Carnegie, L., Hasan, M., Mahmud, R., Hoque, M. A., Debnath, N., Uddin, M. H., …Hill, S. C. (in press). H9N2 avian influenza virus dispersal along Bangladeshi poultry trading networks. Virus Evolution, https://doi.org/10.1093/ve/vead014

Bidirectional Movement of Emerging H5N8 Avian Influenza Viruses Between Europe and Asia via Migratory Birds Since Early 2020 (2023)
Journal Article
Zhang, G., Li, B., Raghwani, J., Vrancken, B., Jia, R., Hill, S., …Tian, H. (2023). Bidirectional Movement of Emerging H5N8 Avian Influenza Viruses Between Europe and Asia via Migratory Birds Since Early 2020. Molecular Biology and Evolution, 40(2), https://doi.org/10.1093/molbev/msad019

Seasonal dynamics of the wild rodent faecal virome (2022)
Journal Article
Raghwani, J., Faust, C. L., François, S., Nguyen, D., Marsh, K., Raulo, A., …Pybus, O. G. (2023). Seasonal dynamics of the wild rodent faecal virome. Molecular Ecology, https://doi.org/10.1111/mec.16778

Viral discovery studies in wild animals often rely on cross-sectional surveys at a single time point. As a result, our understanding of the temporal stability of wild animal viromes remains poorly resolved. While studies of single host-virus systems... Read More about Seasonal dynamics of the wild rodent faecal virome.

Genomic Epidemiology of Early SARS-CoV-2 Transmission Dynamics, Gujarat, India (2022)
Journal Article
Raghwani, J., du Plessis, L., McCrone, J., Hill, S., Parag, K., Theze, J., …Joshi, C. (2022). Genomic Epidemiology of Early SARS-CoV-2 Transmission Dynamics, Gujarat, India. Emerging Infectious Disease, 28(4), 751-758. https://doi.org/10.3201/eid2804.212053

Limited genomic sampling in many high-incidence countries has impeded studies of severe respiratory syndrome coronavirus 2 (SARS-CoV-2) genomic epidemiology. Consequently, critical questions remain about the generation and global distribution of viru... Read More about Genomic Epidemiology of Early SARS-CoV-2 Transmission Dynamics, Gujarat, India.